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Changes between Version 1 and Version 2 of dev-python/numpy/1.2.1/1


Ignore:
Timestamp:
01/09/09 02:06:33 (7 years ago)
Author:
richienyhus
Comment:

Details of Internal compiler error

Legend:

Unmodified
Added
Removed
Modified

  • dev-python/numpy/1.2.1/1

    v1 v2  
    1   
     1Porting Lapack and Atlas or GSL(GNU scientific library) may help with building it(or some kind of Blas anyway). 
     2 
     3 
     4Problems with -lm, and a lack of g95 
     5,Workaround still errors out: 
     6 
     7{{{ 
     8~/Desktop/numpy-1.2.1> python setup.py install 
     9Running from numpy source directory. 
     10non-existing path in 'numpy/distutils': 'site.cfg' 
     11F2PY Version 2_5972 
     12blas_opt_info: 
     13blas_mkl_info: 
     14  libraries mkl,vml,guide not found in /keep/common/lib 
     15  NOT AVAILABLE 
     16 
     17atlas_blas_threads_info: 
     18Setting PTATLAS=ATLAS 
     19  libraries ptf77blas,ptcblas,atlas not found in /keep/common/lib 
     20  NOT AVAILABLE 
     21 
     22atlas_blas_info: 
     23  libraries f77blas,cblas,atlas not found in /keep/common/lib 
     24  NOT AVAILABLE 
     25 
     26/boot/home/Desktop/numpy-1.2.1/numpy/distutils/system_info.py:1340: UserWarning:  
     27    Atlas (http://math-atlas.sourceforge.net/) libraries not found. 
     28    Directories to search for the libraries can be specified in the 
     29    numpy/distutils/site.cfg file (section [atlas]) or by setting 
     30    the ATLAS environment variable. 
     31  warnings.warn(AtlasNotFoundError.__doc__) 
     32blas_info: 
     33  libraries blas not found in /keep/common/lib 
     34  NOT AVAILABLE 
     35 
     36/boot/home/Desktop/numpy-1.2.1/numpy/distutils/system_info.py:1349: UserWarning:  
     37    Blas (http://www.netlib.org/blas/) libraries not found. 
     38    Directories to search for the libraries can be specified in the 
     39    numpy/distutils/site.cfg file (section [blas]) or by setting 
     40    the BLAS environment variable. 
     41  warnings.warn(BlasNotFoundError.__doc__) 
     42blas_src_info: 
     43  NOT AVAILABLE 
     44 
     45/boot/home/Desktop/numpy-1.2.1/numpy/distutils/system_info.py:1352: UserWarning:  
     46    Blas (http://www.netlib.org/blas/) sources not found. 
     47    Directories to search for the sources can be specified in the 
     48    numpy/distutils/site.cfg file (section [blas_src]) or by setting 
     49    the BLAS_SRC environment variable. 
     50  warnings.warn(BlasSrcNotFoundError.__doc__) 
     51  NOT AVAILABLE 
     52 
     53lapack_opt_info: 
     54lapack_mkl_info: 
     55mkl_info: 
     56  libraries mkl,vml,guide not found in /keep/common/lib 
     57  NOT AVAILABLE 
     58 
     59  NOT AVAILABLE 
     60 
     61atlas_threads_info: 
     62Setting PTATLAS=ATLAS 
     63  libraries ptf77blas,ptcblas,atlas not found in /keep/common/lib 
     64  libraries lapack_atlas not found in /keep/common/lib 
     65numpy.distutils.system_info.atlas_threads_info 
     66  NOT AVAILABLE 
     67 
     68atlas_info: 
     69  libraries f77blas,cblas,atlas not found in /keep/common/lib 
     70  libraries lapack_atlas not found in /keep/common/lib 
     71numpy.distutils.system_info.atlas_info 
     72  NOT AVAILABLE 
     73 
     74/boot/home/Desktop/numpy-1.2.1/numpy/distutils/system_info.py:1247: UserWarning:  
     75    Atlas (http://math-atlas.sourceforge.net/) libraries not found. 
     76    Directories to search for the libraries can be specified in the 
     77    numpy/distutils/site.cfg file (section [atlas]) or by setting 
     78    the ATLAS environment variable. 
     79  warnings.warn(AtlasNotFoundError.__doc__) 
     80lapack_info: 
     81  libraries lapack not found in /keep/common/lib 
     82  NOT AVAILABLE 
     83 
     84/boot/home/Desktop/numpy-1.2.1/numpy/distutils/system_info.py:1258: UserWarning:  
     85    Lapack (http://www.netlib.org/lapack/) libraries not found. 
     86    Directories to search for the libraries can be specified in the 
     87    numpy/distutils/site.cfg file (section [lapack]) or by setting 
     88    the LAPACK environment variable. 
     89  warnings.warn(LapackNotFoundError.__doc__) 
     90lapack_src_info: 
     91  NOT AVAILABLE 
     92 
     93/boot/home/Desktop/numpy-1.2.1/numpy/distutils/system_info.py:1261: UserWarning:  
     94    Lapack (http://www.netlib.org/lapack/) sources not found. 
     95    Directories to search for the sources can be specified in the 
     96    numpy/distutils/site.cfg file (section [lapack_src]) or by setting 
     97    the LAPACK_SRC environment variable. 
     98  warnings.warn(LapackSrcNotFoundError.__doc__) 
     99  NOT AVAILABLE 
     100 
     101running install 
     102running build 
     103running config_cc 
     104unifing config_cc, config, build_clib, build_ext, build commands --compiler options 
     105running config_fc 
     106unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options 
     107running build_src 
     108building py_modules sources 
     109building extension "numpy.core.multiarray" sources 
     110  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/config.h' to sources. 
     111  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/numpyconfig.h' to sources. 
     112executing numpy/core/code_generators/generate_numpy_api.py 
     113  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/__multiarray_api.h' to sources. 
     114  adding 'build/src.haiku-1-BePC-2.5/numpy/core/src' to include_dirs. 
     115numpy.core - nothing done with h_files = ['build/src.haiku-1-BePC-2.5/numpy/core/src/scalartypes.inc', 'build/src.haiku-1-BePC-2.5/numpy/core/src/arraytypes.inc', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/config.h', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/numpyconfig.h', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/__multiarray_api.h'] 
     116building extension "numpy.core.umath" sources 
     117  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/config.h' to sources. 
     118  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/numpyconfig.h' to sources. 
     119executing numpy/core/code_generators/generate_ufunc_api.py 
     120  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/__ufunc_api.h' to sources. 
     121  adding 'build/src.haiku-1-BePC-2.5/numpy/core/src' to include_dirs. 
     122numpy.core - nothing done with h_files = ['build/src.haiku-1-BePC-2.5/numpy/core/src/scalartypes.inc', 'build/src.haiku-1-BePC-2.5/numpy/core/src/arraytypes.inc', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/config.h', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/numpyconfig.h', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/__ufunc_api.h'] 
     123building extension "numpy.core._sort" sources 
     124  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/config.h' to sources. 
     125  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/numpyconfig.h' to sources. 
     126executing numpy/core/code_generators/generate_numpy_api.py 
     127  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/__multiarray_api.h' to sources. 
     128numpy.core - nothing done with h_files = ['build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/config.h', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/numpyconfig.h', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/__multiarray_api.h'] 
     129building extension "numpy.core.scalarmath" sources 
     130  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/config.h' to sources. 
     131  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/numpyconfig.h' to sources. 
     132executing numpy/core/code_generators/generate_numpy_api.py 
     133  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/__multiarray_api.h' to sources. 
     134executing numpy/core/code_generators/generate_ufunc_api.py 
     135  adding 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/__ufunc_api.h' to sources. 
     136numpy.core - nothing done with h_files = ['build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/config.h', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/numpyconfig.h', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/__multiarray_api.h', 'build/src.haiku-1-BePC-2.5/numpy/core/include/numpy/__ufunc_api.h'] 
     137building extension "numpy.core._dotblas" sources 
     138building extension "numpy.lib._compiled_base" sources 
     139building extension "numpy.numarray._capi" sources 
     140building extension "numpy.fft.fftpack_lite" sources 
     141building extension "numpy.linalg.lapack_lite" sources 
     142### Warning:  Using unoptimized lapack ### 
     143  adding 'numpy/linalg/lapack_litemodule.c' to sources. 
     144  adding 'numpy/linalg/python_xerbla.c' to sources. 
     145  adding 'numpy/linalg/zlapack_lite.c' to sources. 
     146  adding 'numpy/linalg/dlapack_lite.c' to sources. 
     147  adding 'numpy/linalg/blas_lite.c' to sources. 
     148  adding 'numpy/linalg/dlamch.c' to sources. 
     149  adding 'numpy/linalg/f2c_lite.c' to sources. 
     150building extension "numpy.random.mtrand" sources 
     151customize GnuFCompiler 
     152Could not locate executable g77 
     153Could not locate executable f77 
     154customize Gnu95FCompiler 
     155Could not locate executable gfortran 
     156Could not locate executable f95 
     157don't know how to compile Fortran code on platform 'posix' 
     158C compiler: gcc -fno-strict-aliasing -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -fPIC 
     159 
     160compile options: '-Inumpy/core/src -Inumpy/core/include -I/keep/common/include/python2.5 -c' 
     161gcc: _configtest.c 
     162gcc _configtest.o -o _configtest 
     163_configtest 
     164failure. 
     165removing: _configtest.c _configtest.o _configtest 
     166building data_files sources 
     167running build_py 
     168copying build/src.haiku-1-BePC-2.5/numpy/__config__.py -> build/lib.haiku-1-BePC-2.5/numpy 
     169copying build/src.haiku-1-BePC-2.5/numpy/distutils/__config__.py -> build/lib.haiku-1-BePC-2.5/numpy/distutils 
     170running build_ext 
     171customize UnixCCompiler 
     172customize UnixCCompiler using build_ext 
     173building 'numpy.core.multiarray' extension 
     174compiling C sources 
     175C compiler: gcc -fno-strict-aliasing -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -fPIC 
     176 
     177compile options: '-Ibuild/src.haiku-1-BePC-2.5/numpy/core/src -Inumpy/core/include -Ibuild/src.haiku-1-BePC-2.5/numpy/core/include/numpy -Inumpy/core/src -Inumpy/core/include -I/keep/common/include/python2.5 -c' 
     178gcc: numpy/core/src/multiarraymodule.c 
     179/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_float': 
     180In file included from /boot/home/Desktop/numpy-1.2.1/numpy/core/src/arrayobject.c:536, 
     181                 from /boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c:97: 
     182/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:568: warning: field width is not type int (arg 4) 
     183/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_cfloat': 
     184/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:585: warning: field width is not type int (arg 4) 
     185/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 4) 
     186/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 6) 
     187/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_double': 
     188/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:568: warning: field width is not type int (arg 4) 
     189/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_cdouble': 
     190/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:585: warning: field width is not type int (arg 4) 
     191/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 4) 
     192/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 6) 
     193/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_longdouble': 
     194/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:568: warning: field width is not type int (arg 4) 
     195/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_clongdouble': 
     196/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:585: warning: field width is not type int (arg 4) 
     197/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 4) 
     198/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 6) 
     199/boot/home/Desktop/numpy-1.2.1/numpy/core/src/arrayobject.c: In function `descr_repeat': 
     200In file included from /boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c:97: 
     201/boot/home/Desktop/numpy-1.2.1/numpy/core/src/arrayobject.c:11999: warning: unknown conversion type character `z' in format 
     202/boot/home/Desktop/numpy-1.2.1/numpy/core/src/arrayobject.c:11999: warning: too many arguments for format 
     203/boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c: In function `as_buffer': 
     204/boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c:7291: warning: variable `err' might be clobbered by `longjmp' or `vfork' 
     205/boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c: In function `test_interrupt': 
     206/boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c:7458: warning: variable `a' might be clobbered by `longjmp' or `vfork' 
     207gcc: Internal compiler error: program cc1 got fatal signal 21 
     208/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_float': 
     209In file included from /boot/home/Desktop/numpy-1.2.1/numpy/core/src/arrayobject.c:536, 
     210                 from /boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c:97: 
     211/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:568: warning: field width is not type int (arg 4) 
     212/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_cfloat': 
     213/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:585: warning: field width is not type int (arg 4) 
     214/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 4) 
     215/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 6) 
     216/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_double': 
     217/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:568: warning: field width is not type int (arg 4) 
     218/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_cdouble': 
     219/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:585: warning: field width is not type int (arg 4) 
     220/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 4) 
     221/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 6) 
     222/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_longdouble': 
     223/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:568: warning: field width is not type int (arg 4) 
     224/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src: In function `format_clongdouble': 
     225/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:585: warning: field width is not type int (arg 4) 
     226/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 4) 
     227/boot/home/Desktop/numpy-1.2.1/numpy/core/src/scalartypes.inc.src:588: warning: field width is not type int (arg 6) 
     228/boot/home/Desktop/numpy-1.2.1/numpy/core/src/arrayobject.c: In function `descr_repeat': 
     229In file included from /boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c:97: 
     230/boot/home/Desktop/numpy-1.2.1/numpy/core/src/arrayobject.c:11999: warning: unknown conversion type character `z' in format 
     231/boot/home/Desktop/numpy-1.2.1/numpy/core/src/arrayobject.c:11999: warning: too many arguments for format 
     232/boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c: In function `as_buffer': 
     233/boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c:7291: warning: variable `err' might be clobbered by `longjmp' or `vfork' 
     234/boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c: In function `test_interrupt': 
     235/boot/home/Desktop/numpy-1.2.1/numpy/core/src/multiarraymodule.c:7458: warning: variable `a' might be clobbered by `longjmp' or `vfork' 
     236gcc: Internal compiler error: program cc1 got fatal signal 21 
     237error: Command "gcc -fno-strict-aliasing -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -fPIC -Ibuild/src.haiku-1-BePC-2.5/numpy/core/src -Inumpy/core/include -Ibuild/src.haiku-1-BePC-2.5/numpy/core/include/numpy -Inumpy/core/src -Inumpy/core/include -I/keep/common/include/python2.5 -c numpy/core/src/multiarraymodule.c -o build/temp.haiku-1-BePC-2.5/numpy/core/src/multiarraymodule.o" failed with exit status 1 
     238~/Desktop/numpy-1.2.1>  
     239}}} 
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